STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_7454BQ2448_7454 protein. (781 aa)    
Predicted Functional Partners:
BQ2448_5533
BQ2448_5533 protein.
  
 
 0.752
BQ2448_7455
BQ2448_7455 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.702
BQ2448_7835
BQ2448_7835 protein.
  
 
0.671
BQ2448_6909
BQ2448_6909 protein.
  
 
0.670
BQ2448_8140
BQ2448_8140 protein.
  
 
0.667
BQ2448_954
Non-specific serine/threonine protein kinase.
  
 
0.664
BQ2448_6889
Non-specific serine/threonine protein kinase.
  
 
0.661
BQ2448_537
Non-specific serine/threonine protein kinase.
  
 
0.651
BQ2448_5326
BQ2448_5326 protein.
    
 0.580
BQ2448_5035
BQ2448_5035 protein.
    
 0.580
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.