STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6286BQ2448_6286 protein. (962 aa)    
Predicted Functional Partners:
BQ2448_3216
BQ2448_3216 protein.
   
0.991
BQ2448_3468
BQ2448_3468 protein.
    
  0.732
BQ2448_2275
BQ2448_2275 protein.
    
 0.707
BQ2448_454
BQ2448_454 protein.
    
 0.707
BQ2448_3825
BQ2448_3825 protein.
    
 0.707
BQ2448_3826
BQ2448_3826 protein.
    
 0.707
BQ2448_3976
BQ2448_3976 protein.
    
 0.707
BQ2448_7841
BQ2448_7841 protein.
    
 0.707
BQ2448_6419
BQ2448_6419 protein.
    
 0.707
BQ2448_6476
BQ2448_6476 protein.
    
 0.697
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.