STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6570BQ2448_6570 protein. (763 aa)    
Predicted Functional Partners:
BQ2448_5300
BQ2448_5300 protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
BQ2448_1941
BQ2448_1941 protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
BQ2448_7348
BQ2448_7348 protein.
   
 0.999
BQ2448_6543
BQ2448_6543 protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
BQ2448_1262
BQ2448_1262 protein.
   
 0.997
BQ2448_4046
BQ2448_4046 protein.
   
 0.994
BQ2448_6173
BQ2448_6173 protein.
    
 0.994
BQ2448_5228
BQ2448_5228 protein.
   
 0.804
BQ2448_7879
Tryptophan synthase.
    
  0.778
BQ2448_5406
RBR-type E3 ubiquitin transferase.
 
      0.747
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.