STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_7932Peroxisomal membrane protein PEX16. (420 aa)    
Predicted Functional Partners:
BQ2448_6549
BQ2448_6549 protein.
    
 0.953
BQ2448_3984
BQ2448_3984 protein.
    
 0.887
BQ2448_6854
BQ2448_6854 protein.
  
 
 0.849
BQ2448_5740
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.830
BQ2448_6192
BQ2448_6192 protein.
     
 0.825
BQ2448_3484
BQ2448_3484 protein.
   
 
 0.817
BQ2448_7067
BQ2448_7067 protein.
     
 0.806
BQ2448_81
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
     
 0.773
BQ2448_4769
BQ2448_4769 protein.
    
 0.765
BQ2448_512
BQ2448_512 protein.
     
 0.758
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.