STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_7833BQ2448_7833 protein. (558 aa)    
Predicted Functional Partners:
BQ2448_7834
BQ2448_7834 protein.
 
     0.949
BQ2448_5664
BQ2448_5664 protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.843
BQ2448_4289
BQ2448_4289 protein; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.842
BQ2448_719
BQ2448_719 protein.
    
   0.841
BQ2448_4914
BQ2448_4914 protein.
    
   0.841
BQ2448_4089
BQ2448_4089 protein.
    
   0.841
BQ2448_3328
BQ2448_3328 protein; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.841
BQ2448_4770
BQ2448_4770 protein; Belongs to the universal ribosomal protein uL11 family.
    
   0.841
BQ2448_6658
BQ2448_6658 protein.
    
   0.841
BQ2448_3589
BQ2448_3589 protein.
  
 0.768
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.