Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH99182.1 | SFI28617.1 | SAMN02799642_00402 | SAMN02799642_01387 | Protein SCO1/2. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.945 |
SFH99182.1 | SFI44920.1 | SAMN02799642_00402 | SAMN02799642_01923 | Protein SCO1/2. | Thiol-disulfide isomerase or thioredoxin. | 0.949 |
SFH99182.1 | SFI77926.1 | SAMN02799642_00402 | SAMN02799642_02740 | Protein SCO1/2. | Copper(I)-binding protein. | 0.780 |
SFH99182.1 | SFI79313.1 | SAMN02799642_00402 | SAMN02799642_02788 | Protein SCO1/2. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.895 |
SFH99182.1 | SFI95245.1 | SAMN02799642_00402 | SAMN02799642_03161 | Protein SCO1/2. | Cytochrome bo3 quinol oxidase subunit 2. | 0.931 |
SFH99182.1 | SFI99870.1 | SAMN02799642_00402 | SAMN02799642_03321 | Protein SCO1/2. | Cytochrome c oxidase subunit 2. | 0.977 |
SFH99182.1 | SFJ47175.1 | SAMN02799642_00402 | SAMN02799642_04530 | Protein SCO1/2. | Thiol-disulfide isomerase or thioredoxin. | 0.857 |
SFH99182.1 | ctaA | SAMN02799642_00402 | SAMN02799642_02093 | Protein SCO1/2. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.838 |
SFH99182.1 | ctaG | SAMN02799642_00402 | SAMN02799642_01391 | Protein SCO1/2. | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.793 |
SFH99182.1 | petA | SAMN02799642_00402 | SAMN02799642_00178 | Protein SCO1/2. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.770 |
SFI28617.1 | SFH99182.1 | SAMN02799642_01387 | SAMN02799642_00402 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protein SCO1/2. | 0.945 |
SFI28617.1 | SFI44920.1 | SAMN02799642_01387 | SAMN02799642_01923 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiol-disulfide isomerase or thioredoxin. | 0.920 |
SFI28617.1 | SFI77926.1 | SAMN02799642_01387 | SAMN02799642_02740 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Copper(I)-binding protein. | 0.909 |
SFI28617.1 | SFI79313.1 | SAMN02799642_01387 | SAMN02799642_02788 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.802 |
SFI28617.1 | SFI95245.1 | SAMN02799642_01387 | SAMN02799642_03161 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome bo3 quinol oxidase subunit 2. | 0.678 |
SFI28617.1 | SFI99870.1 | SAMN02799642_01387 | SAMN02799642_03321 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit 2. | 0.957 |
SFI28617.1 | SFJ47175.1 | SAMN02799642_01387 | SAMN02799642_04530 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiol-disulfide isomerase or thioredoxin. | 0.802 |
SFI28617.1 | ctaA | SAMN02799642_01387 | SAMN02799642_02093 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.806 |
SFI28617.1 | ctaG | SAMN02799642_01387 | SAMN02799642_01391 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.988 |
SFI28617.1 | petA | SAMN02799642_01387 | SAMN02799642_00178 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.987 |
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