STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI24946.1phosphoribosyl-dephospho-CoA transferase. (228 aa)    
Predicted Functional Partners:
mdcB
triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
  0.931
SFI24925.1
[acyl-carrier-protein] S-malonyltransferase.
 
   
 0.925
SFI24970.1
Malonate decarboxylase gamma subunit.
 
     0.890
SFI25012.1
Malonate decarboxylase delta subunit.
 
     0.890
SFI24991.1
Malonate decarboxylase beta subunit.
 
     0.887
SFI25034.1
Malonate decarboxylase alpha subunit.
 
     0.850
SFH96079.1
triphosphoribosyl-dephospho-CoA synthase.
    
  0.727
SFI25057.1
Malonate transporter, MadL subunit.
 
     0.676
SFI25076.1
Malonate transporter, MadM subunit.
 
     0.676
SFI24904.1
GDPmannose 4,6-dehydratase.
       0.477
Your Current Organism:
Methylobacterium brachiatum
NCBI taxonomy Id: 269660
Other names: DSM 19569, M. brachiatum, Methylobacterium brachiatum Kato et al. 2008, Methylobacterium sp. B0021, Methylobacterium sp. Hojyo2, Methylobacterium sp. RB603B, NBRC 103629, NCIMB 14379, strain B0021
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