STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI50525.1Short chain dehydrogenase. (141 aa)    
Predicted Functional Partners:
SFJ25907.1
Acyl transferase domain-containing protein.
   
 0.875
SFJ80268.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.825
SFJ75336.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.823
SFI30400.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.787
SFJ75141.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.760
SFH91767.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.757
SFI84805.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.750
SFI28551.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.744
SFJ74035.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.662
SFJ34147.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.649
Your Current Organism:
Methylobacterium brachiatum
NCBI taxonomy Id: 269660
Other names: DSM 19569, M. brachiatum, Methylobacterium brachiatum Kato et al. 2008, Methylobacterium sp. B0021, Methylobacterium sp. Hojyo2, Methylobacterium sp. RB603B, NBRC 103629, NCIMB 14379, strain B0021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.