Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFI55086.1 | SFI55114.1 | SAMN02799642_02192 | SAMN02799642_02193 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.999 |
| SFI55086.1 | SFI55139.1 | SAMN02799642_02192 | SAMN02799642_02194 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center L subunit. | 0.999 |
| SFI55086.1 | SFI55169.1 | SAMN02799642_02192 | SAMN02799642_02195 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.994 |
| SFI55086.1 | SFI55197.1 | SAMN02799642_02192 | SAMN02799642_02196 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.994 |
| SFI55086.1 | SFI55252.1 | SAMN02799642_02192 | SAMN02799642_02198 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyllide a reductase subunit Z. | 0.973 |
| SFI55086.1 | SFI55298.1 | SAMN02799642_02192 | SAMN02799642_02200 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. | 0.911 |
| SFI55086.1 | SFJ21363.1 | SAMN02799642_02192 | SAMN02799642_03779 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | PH domain-containing protein. | 0.956 |
| SFI55086.1 | SFJ21394.1 | SAMN02799642_02192 | SAMN02799642_03780 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center H subunit. | 0.995 |
| SFI55086.1 | SFJ21461.1 | SAMN02799642_02192 | SAMN02799642_03782 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Mg-protoporphyrin IX methyltransferase. | 0.926 |
| SFI55086.1 | bchL | SAMN02799642_02192 | SAMN02799642_03783 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.940 |
| SFI55114.1 | SFI55086.1 | SAMN02799642_02193 | SAMN02799642_02192 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | 0.999 |
| SFI55114.1 | SFI55139.1 | SAMN02799642_02193 | SAMN02799642_02194 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center L subunit. | 0.995 |
| SFI55114.1 | SFI55169.1 | SAMN02799642_02193 | SAMN02799642_02195 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.998 |
| SFI55114.1 | SFI55197.1 | SAMN02799642_02193 | SAMN02799642_02196 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.998 |
| SFI55114.1 | SFI55252.1 | SAMN02799642_02193 | SAMN02799642_02198 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit Z. | 0.975 |
| SFI55114.1 | SFI55298.1 | SAMN02799642_02193 | SAMN02799642_02200 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. | 0.970 |
| SFI55114.1 | SFJ21363.1 | SAMN02799642_02193 | SAMN02799642_03779 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | PH domain-containing protein. | 0.934 |
| SFI55114.1 | SFJ21394.1 | SAMN02799642_02193 | SAMN02799642_03780 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center H subunit. | 0.998 |
| SFI55114.1 | SFJ21461.1 | SAMN02799642_02193 | SAMN02799642_03782 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Mg-protoporphyrin IX methyltransferase. | 0.837 |
| SFI55114.1 | bchL | SAMN02799642_02193 | SAMN02799642_03783 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.947 |
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