STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI89632.1Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (247 aa)    
Predicted Functional Partners:
SFJ54005.1
Trehalose 6-phosphate synthase.
 
 
 0.996
SFH92728.1
Hypothetical protein.
   
    0.975
SFJ53896.1
Maltooligosyl trehalose hydrolase.
 
 0.907
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.897
SFH98354.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.882
SFI86207.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.881
SFJ15868.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.873
SFH99301.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.872
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.857
SFJ52314.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
  
    0.837
Your Current Organism:
Methylobacterium brachiatum
NCBI taxonomy Id: 269660
Other names: DSM 19569, M. brachiatum, Methylobacterium brachiatum Kato et al. 2008, Methylobacterium sp. B0021, Methylobacterium sp. Hojyo2, Methylobacterium sp. RB603B, NBRC 103629, NCIMB 14379, strain B0021
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.