STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ22273.1Protein of unknown function. (307 aa)    
Predicted Functional Partners:
SFI32903.1
Hypothetical protein.
  
     0.748
SFJ04056.1
LPS-assembly lipoprotein.
  
     0.747
SFJ47508.1
TIGR02302 family protein.
  
     0.715
SFI90435.1
Lipopolysaccharide export system protein LptC.
  
     0.714
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.708
SFJ72387.1
Outer membrane immunogenic protein.
  
     0.695
SFI34136.1
Outer membrane immunogenic protein.
  
     0.691
SFJ78679.1
Outer membrane immunogenic protein.
  
     0.690
SFI17697.1
Outer membrane immunogenic protein.
  
     0.684
SFJ24591.1
Outer membrane immunogenic protein.
  
     0.684
Your Current Organism:
Methylobacterium brachiatum
NCBI taxonomy Id: 269660
Other names: DSM 19569, M. brachiatum, Methylobacterium brachiatum Kato et al. 2008, Methylobacterium sp. B0021, Methylobacterium sp. Hojyo2, Methylobacterium sp. RB603B, NBRC 103629, NCIMB 14379, strain B0021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.