STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ62572.1Predicted dehydrogenase. (432 aa)    
Predicted Functional Partners:
SFI07480.1
Sugar phosphate isomerase/epimerase.
 
 
 0.919
SFI15155.1
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.884
cobB-2
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
    
 0.764
SFJ13067.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.722
SFI42128.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.705
SFJ50606.1
2-dehydro-3-deoxygluconokinase.
 
 
 0.703
SFI15221.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.685
SFJ05371.1
D,D-heptose 1,7-bisphosphate phosphatase.
  
 
 0.672
SFI14615.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.667
SFI42081.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.667
Your Current Organism:
Methylobacterium brachiatum
NCBI taxonomy Id: 269660
Other names: DSM 19569, M. brachiatum, Methylobacterium brachiatum Kato et al. 2008, Methylobacterium sp. B0021, Methylobacterium sp. Hojyo2, Methylobacterium sp. RB603B, NBRC 103629, NCIMB 14379, strain B0021
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