Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI09191.1 | SFJ51513.1 | SAMN02799642_00738 | SAMN02799642_04668 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal-body rod modification protein FlgD. | 0.669 |
SFI09191.1 | SFJ66075.1 | SAMN02799642_00738 | SAMN02799642_05102 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein. | 0.786 |
SFJ51513.1 | SFI09191.1 | SAMN02799642_04668 | SAMN02799642_00738 | Flagellar basal-body rod modification protein FlgD. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.669 |
SFJ51513.1 | SFJ66075.1 | SAMN02799642_04668 | SAMN02799642_05102 | Flagellar basal-body rod modification protein FlgD. | Hypothetical protein. | 0.786 |
SFJ66075.1 | SFI09191.1 | SAMN02799642_05102 | SAMN02799642_00738 | Hypothetical protein. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.786 |
SFJ66075.1 | SFJ51513.1 | SAMN02799642_05102 | SAMN02799642_04668 | Hypothetical protein. | Flagellar basal-body rod modification protein FlgD. | 0.786 |
SFJ66075.1 | ribB | SAMN02799642_05102 | SAMN02799642_02142 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.585 |
ribB | SFJ66075.1 | SAMN02799642_02142 | SAMN02799642_05102 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Hypothetical protein. | 0.585 |