STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ81431.1Outer membrane autotransporter barrel domain-containing protein. (370 aa)    
Predicted Functional Partners:
SFJ33383.1
Outer membrane autotransporter barrel domain-containing protein.
 
     0.774
SFI84123.1
Autotransporter-associated beta strand repeat-containing protein.
  
 0.751
SFJ40349.1
Autotransporter-associated beta strand repeat-containing protein.
  
 0.682
SFJ81408.1
Autotransporter-associated beta strand repeat-containing protein.
      0.475
SFI52283.1
Protein of unknown function.
  
     0.467
SFJ34587.1
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family.
  
   0.446
Your Current Organism:
Methylobacterium brachiatum
NCBI taxonomy Id: 269660
Other names: DSM 19569, M. brachiatum, Methylobacterium brachiatum Kato et al. 2008, Methylobacterium sp. B0021, Methylobacterium sp. Hojyo2, Methylobacterium sp. RB603B, NBRC 103629, NCIMB 14379, strain B0021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.