Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFF96951.1 | SFF96974.1 | SAMN02982927_00191 | SAMN02982927_00192 | Uncharacterized protein YpmB. | Aspartate aminotransferase. | 0.690 |
| SFF96951.1 | SFF97017.1 | SAMN02982927_00191 | SAMN02982927_00194 | Uncharacterized protein YpmB. | DNA replication protein. | 0.506 |
| SFF96951.1 | SFF97059.1 | SAMN02982927_00191 | SAMN02982927_00196 | Uncharacterized protein YpmB. | Hypothetical protein. | 0.423 |
| SFF96951.1 | asnS | SAMN02982927_00191 | SAMN02982927_00193 | Uncharacterized protein YpmB. | asparaginyl-tRNA synthetase. | 0.583 |
| SFF96951.1 | nth | SAMN02982927_00191 | SAMN02982927_00195 | Uncharacterized protein YpmB. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.430 |
| SFF96974.1 | SFF96951.1 | SAMN02982927_00192 | SAMN02982927_00191 | Aspartate aminotransferase. | Uncharacterized protein YpmB. | 0.690 |
| SFF96974.1 | SFF97017.1 | SAMN02982927_00192 | SAMN02982927_00194 | Aspartate aminotransferase. | DNA replication protein. | 0.451 |
| SFF96974.1 | SFF97059.1 | SAMN02982927_00192 | SAMN02982927_00196 | Aspartate aminotransferase. | Hypothetical protein. | 0.428 |
| SFF96974.1 | asnS | SAMN02982927_00192 | SAMN02982927_00193 | Aspartate aminotransferase. | asparaginyl-tRNA synthetase. | 0.687 |
| SFF96974.1 | nth | SAMN02982927_00192 | SAMN02982927_00195 | Aspartate aminotransferase. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.454 |
| SFF97017.1 | SFF96951.1 | SAMN02982927_00194 | SAMN02982927_00191 | DNA replication protein. | Uncharacterized protein YpmB. | 0.506 |
| SFF97017.1 | SFF96974.1 | SAMN02982927_00194 | SAMN02982927_00192 | DNA replication protein. | Aspartate aminotransferase. | 0.451 |
| SFF97017.1 | SFF97059.1 | SAMN02982927_00194 | SAMN02982927_00196 | DNA replication protein. | Hypothetical protein. | 0.820 |
| SFF97017.1 | asnS | SAMN02982927_00194 | SAMN02982927_00193 | DNA replication protein. | asparaginyl-tRNA synthetase. | 0.556 |
| SFF97017.1 | nth | SAMN02982927_00194 | SAMN02982927_00195 | DNA replication protein. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.948 |
| SFF97059.1 | SFF96951.1 | SAMN02982927_00196 | SAMN02982927_00191 | Hypothetical protein. | Uncharacterized protein YpmB. | 0.423 |
| SFF97059.1 | SFF96974.1 | SAMN02982927_00196 | SAMN02982927_00192 | Hypothetical protein. | Aspartate aminotransferase. | 0.428 |
| SFF97059.1 | SFF97017.1 | SAMN02982927_00196 | SAMN02982927_00194 | Hypothetical protein. | DNA replication protein. | 0.820 |
| SFF97059.1 | asnS | SAMN02982927_00196 | SAMN02982927_00193 | Hypothetical protein. | asparaginyl-tRNA synthetase. | 0.550 |
| SFF97059.1 | nth | SAMN02982927_00196 | SAMN02982927_00195 | Hypothetical protein. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.834 |
page 1 of 2