STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF99852.1Oligopeptide transport system substrate-binding protein. (577 aa)    
Predicted Functional Partners:
SFG36383.1
Oligopeptide transport system permease protein.
 
 0.888
SFF98294.1
Dipeptide transport system permease protein.
 
 0.887
SFG79166.1
Oligopeptide transport system permease protein.
 
 0.885
SFG36422.1
Oligopeptide transport system permease protein.
 
 0.882
SFG79190.1
Oligopeptide transport system permease protein.
 
 0.879
SFF98276.1
Dipeptide transport system permease protein.
 
 0.874
SFG68053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.822
SFG79211.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.794
SFG79232.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.761
SFG36455.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.719
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.