Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFG06633.1 | SFG06707.1 | SAMN02982927_00533 | SAMN02982927_00536 | Post-transcriptional regulator. | Uncharacterized integral membrane protein. | 0.562 |
| SFG06633.1 | SFG06731.1 | SAMN02982927_00533 | SAMN02982927_00537 | Post-transcriptional regulator. | single-stranded-DNA-specific exonuclease. | 0.517 |
| SFG06633.1 | apt | SAMN02982927_00533 | SAMN02982927_00538 | Post-transcriptional regulator. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.408 |
| SFG06633.1 | secD | SAMN02982927_00533 | SAMN02982927_00534 | Post-transcriptional regulator. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.660 |
| SFG06633.1 | secF | SAMN02982927_00533 | SAMN02982927_00535 | Post-transcriptional regulator. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.660 |
| SFG06707.1 | SFG06633.1 | SAMN02982927_00536 | SAMN02982927_00533 | Uncharacterized integral membrane protein. | Post-transcriptional regulator. | 0.562 |
| SFG06707.1 | SFG06731.1 | SAMN02982927_00536 | SAMN02982927_00537 | Uncharacterized integral membrane protein. | single-stranded-DNA-specific exonuclease. | 0.686 |
| SFG06707.1 | apt | SAMN02982927_00536 | SAMN02982927_00538 | Uncharacterized integral membrane protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.533 |
| SFG06707.1 | secD | SAMN02982927_00536 | SAMN02982927_00534 | Uncharacterized integral membrane protein. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.732 |
| SFG06707.1 | secF | SAMN02982927_00536 | SAMN02982927_00535 | Uncharacterized integral membrane protein. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.732 |
| SFG06731.1 | SFG06633.1 | SAMN02982927_00537 | SAMN02982927_00533 | single-stranded-DNA-specific exonuclease. | Post-transcriptional regulator. | 0.517 |
| SFG06731.1 | SFG06707.1 | SAMN02982927_00537 | SAMN02982927_00536 | single-stranded-DNA-specific exonuclease. | Uncharacterized integral membrane protein. | 0.686 |
| SFG06731.1 | apt | SAMN02982927_00537 | SAMN02982927_00538 | single-stranded-DNA-specific exonuclease. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.700 |
| SFG06731.1 | secD | SAMN02982927_00537 | SAMN02982927_00534 | single-stranded-DNA-specific exonuclease. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.750 |
| SFG06731.1 | secF | SAMN02982927_00537 | SAMN02982927_00535 | single-stranded-DNA-specific exonuclease. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.752 |
| apt | SFG06633.1 | SAMN02982927_00538 | SAMN02982927_00533 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Post-transcriptional regulator. | 0.408 |
| apt | SFG06707.1 | SAMN02982927_00538 | SAMN02982927_00536 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Uncharacterized integral membrane protein. | 0.533 |
| apt | SFG06731.1 | SAMN02982927_00538 | SAMN02982927_00537 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | single-stranded-DNA-specific exonuclease. | 0.700 |
| apt | secD | SAMN02982927_00538 | SAMN02982927_00534 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.560 |
| apt | secF | SAMN02982927_00538 | SAMN02982927_00535 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.560 |
page 1 of 2