Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG10333.1 | SFG10358.1 | SAMN02982927_00683 | SAMN02982927_00684 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFG10333.1 | SFG10382.1 | SAMN02982927_00683 | SAMN02982927_00685 | Hypothetical protein. | HNH endonuclease. | 0.678 |
SFG10333.1 | SFG10404.1 | SAMN02982927_00683 | SAMN02982927_00686 | Hypothetical protein. | Hypothetical protein. | 0.469 |
SFG10333.1 | SFG10433.1 | SAMN02982927_00683 | SAMN02982927_00687 | Hypothetical protein. | Phage terminase-like protein, large subunit, contains N-terminal HTH domain. | 0.469 |
SFG10333.1 | SFG10455.1 | SAMN02982927_00683 | SAMN02982927_00688 | Hypothetical protein. | Phage portal protein, HK97 family. | 0.432 |
SFG10358.1 | SFG10333.1 | SAMN02982927_00684 | SAMN02982927_00683 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFG10358.1 | SFG10382.1 | SAMN02982927_00684 | SAMN02982927_00685 | Hypothetical protein. | HNH endonuclease. | 0.762 |
SFG10358.1 | SFG10404.1 | SAMN02982927_00684 | SAMN02982927_00686 | Hypothetical protein. | Hypothetical protein. | 0.531 |
SFG10358.1 | SFG10433.1 | SAMN02982927_00684 | SAMN02982927_00687 | Hypothetical protein. | Phage terminase-like protein, large subunit, contains N-terminal HTH domain. | 0.801 |
SFG10358.1 | SFG10455.1 | SAMN02982927_00684 | SAMN02982927_00688 | Hypothetical protein. | Phage portal protein, HK97 family. | 0.581 |
SFG10382.1 | SFG10333.1 | SAMN02982927_00685 | SAMN02982927_00683 | HNH endonuclease. | Hypothetical protein. | 0.678 |
SFG10382.1 | SFG10358.1 | SAMN02982927_00685 | SAMN02982927_00684 | HNH endonuclease. | Hypothetical protein. | 0.762 |
SFG10382.1 | SFG10404.1 | SAMN02982927_00685 | SAMN02982927_00686 | HNH endonuclease. | Hypothetical protein. | 0.528 |
SFG10382.1 | SFG10433.1 | SAMN02982927_00685 | SAMN02982927_00687 | HNH endonuclease. | Phage terminase-like protein, large subunit, contains N-terminal HTH domain. | 0.560 |
SFG10382.1 | SFG10455.1 | SAMN02982927_00685 | SAMN02982927_00688 | HNH endonuclease. | Phage portal protein, HK97 family. | 0.519 |
SFG10382.1 | SFG14119.1 | SAMN02982927_00685 | SAMN02982927_00753 | HNH endonuclease. | Inner membrane protein. | 0.563 |
SFG10382.1 | SFG83983.1 | SAMN02982927_00685 | SAMN02982927_02947 | HNH endonuclease. | Methyltransferase domain-containing protein. | 0.804 |
SFG10382.1 | SFG96168.1 | SAMN02982927_00685 | SAMN02982927_03390 | HNH endonuclease. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.495 |
SFG10382.1 | metK | SAMN02982927_00685 | SAMN02982927_01648 | HNH endonuclease. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.623 |
SFG10382.1 | mtnN | SAMN02982927_00685 | SAMN02982927_00569 | HNH endonuclease. | Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.506 |
page 1 of 3