STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG10404.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SFG10433.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
       0.799
SFG10496.1
Hypothetical protein.
       0.735
SFG10455.1
Phage portal protein, HK97 family.
       0.722
SFG10520.1
Phage major capsid protein, HK97 family.
       0.637
SFG10565.1
Uncharacterized phage protein (possible DNA packaging).
       0.571
SFG10358.1
Hypothetical protein.
       0.531
SFG10382.1
HNH endonuclease.
       0.528
SFG10541.1
Hypothetical protein.
       0.515
SFG10588.1
Hypothetical protein.
       0.515
SFG10616.1
Phage protein, HK97 gp10 family.
       0.515
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.