STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG13794.1Uncharacterized membrane protein YgaE, UPF0421/DUF939 family. (354 aa)    
Predicted Functional Partners:
SFG26993.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
     0.663
SFG77548.1
Cell division protein DivIC.
  
     0.632
SFG42561.1
Uncharacterized protein YtpQ, UPF0354 family.
  
     0.616
SFG36709.1
Predicted dithiol-disulfide isomerase, DsbA family.
  
     0.612
hemL-2
Glutamate-1-semialdehyde 2,1-aminomutase.
 
     0.579
SFG23356.1
YwhD family protein.
  
     0.577
lipL
octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.
  
     0.557
SFG38690.1
Uncharacterized protein YlaN, UPF0358 family; Belongs to the UPF0358 family.
  
     0.554
SFG43751.1
Replicative DNA helicase loader DnaB.
  
     0.544
SFG42664.1
Uncharacterized protein YoxC, contains an MCP-like domain.
  
     0.536
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.