Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG02401.1 | SFG14468.1 | SAMN02982927_00461 | SAMN02982927_00769 | Serine/threonine protein kinase. | Membrane protein; Belongs to the UPF0761 family. | 0.462 |
SFG14468.1 | SFG02401.1 | SAMN02982927_00769 | SAMN02982927_00461 | Membrane protein; Belongs to the UPF0761 family. | Serine/threonine protein kinase. | 0.462 |
SFG14468.1 | SFG14484.1 | SAMN02982927_00769 | SAMN02982927_00770 | Membrane protein; Belongs to the UPF0761 family. | Hypothetical protein. | 0.645 |
SFG14468.1 | SFG14509.1 | SAMN02982927_00769 | SAMN02982927_00771 | Membrane protein; Belongs to the UPF0761 family. | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.753 |
SFG14468.1 | guaB | SAMN02982927_00769 | SAMN02982927_01150 | Membrane protein; Belongs to the UPF0761 family. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.423 |
SFG14468.1 | polA | SAMN02982927_00769 | SAMN02982927_01714 | Membrane protein; Belongs to the UPF0761 family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.478 |
SFG14484.1 | SFG14468.1 | SAMN02982927_00770 | SAMN02982927_00769 | Hypothetical protein. | Membrane protein; Belongs to the UPF0761 family. | 0.645 |
SFG14484.1 | SFG14509.1 | SAMN02982927_00770 | SAMN02982927_00771 | Hypothetical protein. | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.505 |
SFG14509.1 | SFG14468.1 | SAMN02982927_00771 | SAMN02982927_00769 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Membrane protein; Belongs to the UPF0761 family. | 0.753 |
SFG14509.1 | SFG14484.1 | SAMN02982927_00771 | SAMN02982927_00770 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Hypothetical protein. | 0.505 |
guaB | SFG14468.1 | SAMN02982927_01150 | SAMN02982927_00769 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Membrane protein; Belongs to the UPF0761 family. | 0.423 |
guaB | polA | SAMN02982927_01150 | SAMN02982927_01714 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.492 |
polA | SFG14468.1 | SAMN02982927_01714 | SAMN02982927_00769 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Membrane protein; Belongs to the UPF0761 family. | 0.478 |
polA | guaB | SAMN02982927_01714 | SAMN02982927_01150 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.492 |