STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG14509.1Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (154 aa)    
Predicted Functional Partners:
SFG94730.1
Protein-tyrosine phosphatase.
     
 0.847
SFG48218.1
Protein-tyrosine phosphatase.
     
 0.835
SFG92329.1
Protein tyrosine/serine phosphatase.
     
 0.835
SFG20333.1
Homocysteine S-methyltransferase.
    
  0.816
SFG14468.1
Membrane protein; Belongs to the UPF0761 family.
  
  
 0.753
SFG59798.1
Fructosamine-3-kinase.
     0.713
SFG05538.1
Tetratricopeptide repeat-containing protein.
  
 
 0.571
SFG44405.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.571
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.556
SFG14528.1
Oligoendopeptidase, pepF/M3 family.
       0.538
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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