STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG17927.1O-acetylhomoserine (thiol)-lyase. (436 aa)    
Predicted Functional Partners:
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
 
 0.970
metE
Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.922
SFG17980.1
Cystathionine beta-lyase.
 
 
0.916
SFG20333.1
Homocysteine S-methyltransferase.
  
 
 0.909
SFG20361.1
Cystathionine beta-lyase.
 
 
0.874
SFG20384.1
Cystathionine gamma-synthase.
 
 
0.874
SFG18227.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.859
SFG47109.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.859
SFG52780.1
Methionine synthase II (cobalamin-independent).
  
 
 0.851
SFG07532.1
O-acetylserine dependent cystathionine beta-synthase.
 
 
 0.844
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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