STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG20562.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (339 aa)    
Predicted Functional Partners:
SFG20488.1
Putative ABC transport system permease protein.
 
 
 0.997
SFG20512.1
Putative ABC transport system ATP-binding protein.
 
 0.985
SFG47667.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.969
SFG99128.1
FtsX-like permease family protein.
 
 
 0.953
SFG32119.1
ABC-type lipoprotein export system, ATPase component.
 
 
 0.915
SFG23603.1
PTS system, beta-glucosides-specific IIC component.
     
 0.845
SFG85061.1
PTS system, glucose subfamily, IIA component.
     
 0.845
SFG37869.1
Putative ABC transport system permease protein.
  
 
 0.798
SFG63577.1
Putative ABC transport system permease protein.
  
 
 0.798
SFG68053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
   0.682
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.