Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG21610.1 | SFG21653.1 | SAMN02982927_00992 | SAMN02982927_00993 | L-arginine ABC transporter ATP-binding protein. | L-arginine ABC transporter membrane protein. | 0.997 |
SFG21610.1 | SFG21684.1 | SAMN02982927_00992 | SAMN02982927_00994 | L-arginine ABC transporter ATP-binding protein. | L-arginine-binding protein; Belongs to the bacterial solute-binding protein 3 family. | 0.978 |
SFG21610.1 | SFG21710.1 | SAMN02982927_00992 | SAMN02982927_00995 | L-arginine ABC transporter ATP-binding protein. | Arginine utilization protein RocB. | 0.533 |
SFG21610.1 | SFG21735.1 | SAMN02982927_00992 | SAMN02982927_00996 | L-arginine ABC transporter ATP-binding protein. | N-Dimethylarginine dimethylaminohydrolase. | 0.478 |
SFG21653.1 | SFG21610.1 | SAMN02982927_00993 | SAMN02982927_00992 | L-arginine ABC transporter membrane protein. | L-arginine ABC transporter ATP-binding protein. | 0.997 |
SFG21653.1 | SFG21684.1 | SAMN02982927_00993 | SAMN02982927_00994 | L-arginine ABC transporter membrane protein. | L-arginine-binding protein; Belongs to the bacterial solute-binding protein 3 family. | 0.998 |
SFG21653.1 | SFG21710.1 | SAMN02982927_00993 | SAMN02982927_00995 | L-arginine ABC transporter membrane protein. | Arginine utilization protein RocB. | 0.533 |
SFG21653.1 | SFG21735.1 | SAMN02982927_00993 | SAMN02982927_00996 | L-arginine ABC transporter membrane protein. | N-Dimethylarginine dimethylaminohydrolase. | 0.478 |
SFG21684.1 | SFG21610.1 | SAMN02982927_00994 | SAMN02982927_00992 | L-arginine-binding protein; Belongs to the bacterial solute-binding protein 3 family. | L-arginine ABC transporter ATP-binding protein. | 0.978 |
SFG21684.1 | SFG21653.1 | SAMN02982927_00994 | SAMN02982927_00993 | L-arginine-binding protein; Belongs to the bacterial solute-binding protein 3 family. | L-arginine ABC transporter membrane protein. | 0.998 |
SFG21684.1 | SFG21710.1 | SAMN02982927_00994 | SAMN02982927_00995 | L-arginine-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Arginine utilization protein RocB. | 0.603 |
SFG21684.1 | SFG21735.1 | SAMN02982927_00994 | SAMN02982927_00996 | L-arginine-binding protein; Belongs to the bacterial solute-binding protein 3 family. | N-Dimethylarginine dimethylaminohydrolase. | 0.539 |
SFG21710.1 | SFG21610.1 | SAMN02982927_00995 | SAMN02982927_00992 | Arginine utilization protein RocB. | L-arginine ABC transporter ATP-binding protein. | 0.533 |
SFG21710.1 | SFG21653.1 | SAMN02982927_00995 | SAMN02982927_00993 | Arginine utilization protein RocB. | L-arginine ABC transporter membrane protein. | 0.533 |
SFG21710.1 | SFG21684.1 | SAMN02982927_00995 | SAMN02982927_00994 | Arginine utilization protein RocB. | L-arginine-binding protein; Belongs to the bacterial solute-binding protein 3 family. | 0.603 |
SFG21710.1 | SFG21735.1 | SAMN02982927_00995 | SAMN02982927_00996 | Arginine utilization protein RocB. | N-Dimethylarginine dimethylaminohydrolase. | 0.868 |
SFG21710.1 | SFG70379.1 | SAMN02982927_00995 | SAMN02982927_02493 | Arginine utilization protein RocB. | Transcriptional regulator, RpiR family. | 0.422 |
SFG21710.1 | SFG92408.1 | SAMN02982927_00995 | SAMN02982927_03248 | Arginine utilization protein RocB. | Catechol 2,3-dioxygenase. | 0.499 |
SFG21710.1 | SFG99799.1 | SAMN02982927_00995 | SAMN02982927_03528 | Arginine utilization protein RocB. | Transcriptional regulatory protein LevR, contains PRD, AAA+ and EIIA domains. | 0.517 |
SFG21735.1 | SFG21610.1 | SAMN02982927_00996 | SAMN02982927_00992 | N-Dimethylarginine dimethylaminohydrolase. | L-arginine ABC transporter ATP-binding protein. | 0.478 |
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