STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG29554.1N-acetylmuramoyl-L-alanine amidase. (249 aa)    
Predicted Functional Partners:
SFG52834.1
N-acetylmuramoyl-L-alanine amidase.
0.954
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 
 0.930
SFG21187.1
Beta-N-acetylglucosaminidase.
 
 
 0.905
SFG23293.1
Penicillin-binding protein, 1A family.
  
 
 0.888
SFG42745.1
Penicillin-binding protein.
  
 
 0.884
SFG68861.1
Penicillin-binding protein 2A.
  
 
 0.878
SFF95169.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.873
SFF97077.1
Penicillin-binding protein 1A.
  
 
 0.870
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.853
SFF99451.1
Uncharacterized protein YvpB.
    
  0.842
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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