STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG31425.13-hydroxyisobutyrate dehydrogenase. (287 aa)    
Predicted Functional Partners:
SFG59925.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.872
SFG61044.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.872
SFG68053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.857
SFG24276.1
3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.855
SFG28470.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.853
SFF97275.1
acetyl-CoA synthetase.
  
 
 0.693
SFG99733.1
Formate C-acetyltransferase.
   
 
  0.663
SFG33977.1
4-carboxymuconolactone decarboxylase.
  
 
 0.636
SFG31414.1
Collagenase-like protease, PrtC family.
       0.497
SFF97839.1
Pyrophosphatase PpaX.
  
  
  0.485
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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