Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG08611.1 | dacA | SAMN02982927_00615 | SAMN02982927_02474 | Hypothetical protein. | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.413 |
SFG62874.1 | dacA | SAMN02982927_02259 | SAMN02982927_02474 | Phosphoglucomutase. | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.649 |
SFG62874.1 | glmM | SAMN02982927_02259 | SAMN02982927_02472 | Phosphoglucomutase. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.516 |
SFG69902.1 | SFG69949.1 | SAMN02982927_02473 | SAMN02982927_02475 | YbbR domain-containing protein. | Putative zinc-finger. | 0.530 |
SFG69902.1 | SFG69982.1 | SAMN02982927_02473 | SAMN02982927_02476 | YbbR domain-containing protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.484 |
SFG69902.1 | dacA | SAMN02982927_02473 | SAMN02982927_02474 | YbbR domain-containing protein. | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.978 |
SFG69902.1 | glmM | SAMN02982927_02473 | SAMN02982927_02472 | YbbR domain-containing protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.654 |
SFG69949.1 | SFG69902.1 | SAMN02982927_02475 | SAMN02982927_02473 | Putative zinc-finger. | YbbR domain-containing protein. | 0.530 |
SFG69949.1 | SFG69982.1 | SAMN02982927_02475 | SAMN02982927_02476 | Putative zinc-finger. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.943 |
SFG69949.1 | dacA | SAMN02982927_02475 | SAMN02982927_02474 | Putative zinc-finger. | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.530 |
SFG69949.1 | glmM | SAMN02982927_02475 | SAMN02982927_02472 | Putative zinc-finger. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.415 |
SFG69982.1 | SFG69902.1 | SAMN02982927_02476 | SAMN02982927_02473 | RNA polymerase sigma-70 factor, ECF subfamily. | YbbR domain-containing protein. | 0.484 |
SFG69982.1 | SFG69949.1 | SAMN02982927_02476 | SAMN02982927_02475 | RNA polymerase sigma-70 factor, ECF subfamily. | Putative zinc-finger. | 0.943 |
SFG69982.1 | dacA | SAMN02982927_02476 | SAMN02982927_02474 | RNA polymerase sigma-70 factor, ECF subfamily. | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.481 |
dacA | SFG08611.1 | SAMN02982927_02474 | SAMN02982927_00615 | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | Hypothetical protein. | 0.413 |
dacA | SFG62874.1 | SAMN02982927_02474 | SAMN02982927_02259 | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | Phosphoglucomutase. | 0.649 |
dacA | SFG69902.1 | SAMN02982927_02474 | SAMN02982927_02473 | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | YbbR domain-containing protein. | 0.978 |
dacA | SFG69949.1 | SAMN02982927_02474 | SAMN02982927_02475 | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | Putative zinc-finger. | 0.530 |
dacA | SFG69982.1 | SAMN02982927_02474 | SAMN02982927_02476 | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.481 |
dacA | glmM | SAMN02982927_02474 | SAMN02982927_02472 | Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.918 |
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