STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase. (413 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.999
hutH
Histidine ammonia-lyase.
 
  
 0.979
SFG14626.1
Arginase family protein; Belongs to the arginase family.
  
 
 0.691
SFG70333.1
5-methylthioadenosine/S-adenosylhomocysteine deaminase.
 
 
 0.676
SFG70096.1
NitT/TauT family transport system permease protein.
       0.675
SFF97439.1
Formiminotetrahydrofolate cyclodeaminase.
 
 
  0.669
SFG70072.1
NitT/TauT family transport system ATP-binding protein.
       0.656
SFG70183.1
NitT/TauT family transport system substrate-binding protein.
       0.553
SFG70294.1
Predicted aconitase subunit 2.
 
     0.510
SFG70314.1
Predicted aconitase subunit 1.
 
     0.506
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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