STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG70270.12-deoxy-D-gluconate 3-dehydrogenase. (255 aa)    
Predicted Functional Partners:
SFG53834.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.893
SFG68053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.867
SFG23603.1
PTS system, beta-glucosides-specific IIC component.
     
 0.837
SFG85061.1
PTS system, glucose subfamily, IIA component.
     
 0.837
SFG70253.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
 
  0.808
SFG43444.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.753
SFG70294.1
Predicted aconitase subunit 2.
       0.746
SFG70314.1
Predicted aconitase subunit 1.
       0.746
SFG02245.1
[acyl-carrier-protein] S-malonyltransferase.
 0.718
hisD-2
Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.694
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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