Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFG01850.1 | SFG73159.1 | SAMN02982927_00428 | SAMN02982927_02590 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Anti-sigma-28 factor, FlgM family. | 0.850 |
| SFG01850.1 | SFG73182.1 | SAMN02982927_00428 | SAMN02982927_02591 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | FlgN protein. | 0.797 |
| SFG01850.1 | SFG73226.1 | SAMN02982927_00428 | SAMN02982927_02593 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-associated protein 3 FlgL. | 0.942 |
| SFG01850.1 | SFH00575.1 | SAMN02982927_00428 | SAMN02982927_03551 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.971 |
| SFG01850.1 | SFH00594.1 | SAMN02982927_00428 | SAMN02982927_03552 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar protein FliS. | 0.972 |
| SFG01850.1 | csrA | SAMN02982927_00428 | SAMN02982927_02596 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.680 |
| SFG01850.1 | flgK | SAMN02982927_00428 | SAMN02982927_02592 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-associated protein 1 FlgK. | 0.988 |
| SFG01850.1 | fliW | SAMN02982927_00428 | SAMN02982927_02595 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.761 |
| SFG73159.1 | SFG01850.1 | SAMN02982927_02590 | SAMN02982927_00428 | Anti-sigma-28 factor, FlgM family. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.850 |
| SFG73159.1 | SFG73182.1 | SAMN02982927_02590 | SAMN02982927_02591 | Anti-sigma-28 factor, FlgM family. | FlgN protein. | 0.994 |
| SFG73159.1 | SFG73226.1 | SAMN02982927_02590 | SAMN02982927_02593 | Anti-sigma-28 factor, FlgM family. | Flagellar hook-associated protein 3 FlgL. | 0.930 |
| SFG73159.1 | SFG73252.1 | SAMN02982927_02590 | SAMN02982927_02594 | Anti-sigma-28 factor, FlgM family. | Hypothetical protein. | 0.824 |
| SFG73159.1 | SFH00575.1 | SAMN02982927_02590 | SAMN02982927_03551 | Anti-sigma-28 factor, FlgM family. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.917 |
| SFG73159.1 | SFH00594.1 | SAMN02982927_02590 | SAMN02982927_03552 | Anti-sigma-28 factor, FlgM family. | Flagellar protein FliS. | 0.981 |
| SFG73159.1 | csrA | SAMN02982927_02590 | SAMN02982927_02596 | Anti-sigma-28 factor, FlgM family. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.759 |
| SFG73159.1 | flgK | SAMN02982927_02590 | SAMN02982927_02592 | Anti-sigma-28 factor, FlgM family. | Flagellar hook-associated protein 1 FlgK. | 0.964 |
| SFG73159.1 | fliW | SAMN02982927_02590 | SAMN02982927_02595 | Anti-sigma-28 factor, FlgM family. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.818 |
| SFG73182.1 | SFG01850.1 | SAMN02982927_02591 | SAMN02982927_00428 | FlgN protein. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.797 |
| SFG73182.1 | SFG73159.1 | SAMN02982927_02591 | SAMN02982927_02590 | FlgN protein. | Anti-sigma-28 factor, FlgM family. | 0.994 |
| SFG73182.1 | SFG73226.1 | SAMN02982927_02591 | SAMN02982927_02593 | FlgN protein. | Flagellar hook-associated protein 3 FlgL. | 0.975 |
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