STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG74857.1Type I phosphodiesterase / nucleotide pyrophosphatase. (277 aa)    
Predicted Functional Partners:
SFG74835.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
    0.955
SFG74895.1
Putative spermidine/putrescine transport system permease protein.
 
    0.954
SFG74878.1
Putative spermidine/putrescine transport system permease protein.
 
     0.950
SFG74918.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.798
SFG44705.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
   
 0.643
SFG53465.1
Type II pantothenate kinase.
  
  
  0.572
SFF95888.1
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.568
SFG32720.1
Hypothetical protein.
     
 0.567
SFG25826.1
Deoxyadenosine/deoxycytidine kinase.
    
  0.537
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.524
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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