STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG76834.1Two component transcriptional regulator, LuxR family. (225 aa)    
Predicted Functional Partners:
SFG76790.1
Two-component system, NarL family, sensor histidine kinase ComP.
 
  0.992
SFG76810.1
Two-component system, NarL family, sensor histidine kinase ComP.
 
  0.991
SFG32720.1
Hypothetical protein.
  
 0.930
SFG37779.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
 0.928
SFG85267.1
Signal transduction histidine kinase.
  
 0.896
SFG15261.1
Two-component system, NarL family, sensor histidine kinase ComP.
  
  0.880
SFG73009.1
Two-component system, NarL family, sensor histidine kinase DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.
  
  0.880
SFG91493.1
Two-component system, NarL family, sensor histidine kinase LiaS.
  
  0.879
SFG13890.1
Two-component system, NarL family, sensor histidine kinase LiaS.
  
  0.869
SFG63297.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.867
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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