STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG83454.1Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein. (134 aa)    
Predicted Functional Partners:
SFG68053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.856
SFG20627.1
Anthranilate synthase, component I.
   
 
 0.825
SFG23603.1
PTS system, beta-glucosides-specific IIC component.
   
 
  0.713
SFG85061.1
PTS system, glucose subfamily, IIA component.
   
 
  0.713
SFG83433.1
Nicotinamidase-related amidase.
 
    0.695
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
   
 
 0.676
SFG53834.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.475
SFG83413.1
Arginine utilization protein RocB.
 
     0.445
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.