STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG87179.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (314 aa)    
Predicted Functional Partners:
SFG53834.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.893
SFG68053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.867
SFG23603.1
PTS system, beta-glucosides-specific IIC component.
     
 0.837
SFG85061.1
PTS system, glucose subfamily, IIA component.
     
 0.837
SFG43444.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.753
SFG02245.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.662
SFG32079.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.658
SFG67417.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.647
SFG17475.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
 0.644
SFG47427.1
PTS system, glucitol/sorbitol-specific IIC component.
  
 
  0.620
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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