Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFG07005.1 | SFG88445.1 | SAMN02982927_00549 | SAMN02982927_03086 | Prespore-specific regulator. | Protein YqhG of unknown function. | 0.775 |
| SFG07005.1 | SFG88467.1 | SAMN02982927_00549 | SAMN02982927_03087 | Prespore-specific regulator. | Helicase conserved C-terminal domain-containing protein. | 0.727 |
| SFG26136.1 | SFG88467.1 | SAMN02982927_01156 | SAMN02982927_03087 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Helicase conserved C-terminal domain-containing protein. | 0.744 |
| SFG26136.1 | polA | SAMN02982927_01156 | SAMN02982927_01714 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.993 |
| SFG26136.1 | recA | SAMN02982927_01156 | SAMN02982927_00364 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.872 |
| SFG26136.1 | rpoA | SAMN02982927_01156 | SAMN02982927_02892 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.566 |
| SFG26136.1 | rpoB | SAMN02982927_01156 | SAMN02982927_02858 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.623 |
| SFG26136.1 | rpoC | SAMN02982927_01156 | SAMN02982927_02859 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.504 |
| SFG39225.1 | SFG88445.1 | SAMN02982927_01583 | SAMN02982927_03086 | Myb-like DNA-binding domain-containing protein. | Protein YqhG of unknown function. | 0.774 |
| SFG39225.1 | SFG88467.1 | SAMN02982927_01583 | SAMN02982927_03087 | Myb-like DNA-binding domain-containing protein. | Helicase conserved C-terminal domain-containing protein. | 0.723 |
| SFG88445.1 | SFG07005.1 | SAMN02982927_03086 | SAMN02982927_00549 | Protein YqhG of unknown function. | Prespore-specific regulator. | 0.775 |
| SFG88445.1 | SFG39225.1 | SAMN02982927_03086 | SAMN02982927_01583 | Protein YqhG of unknown function. | Myb-like DNA-binding domain-containing protein. | 0.774 |
| SFG88445.1 | SFG88467.1 | SAMN02982927_03086 | SAMN02982927_03087 | Protein YqhG of unknown function. | Helicase conserved C-terminal domain-containing protein. | 0.941 |
| SFG88467.1 | SFG07005.1 | SAMN02982927_03087 | SAMN02982927_00549 | Helicase conserved C-terminal domain-containing protein. | Prespore-specific regulator. | 0.727 |
| SFG88467.1 | SFG26136.1 | SAMN02982927_03087 | SAMN02982927_01156 | Helicase conserved C-terminal domain-containing protein. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.744 |
| SFG88467.1 | SFG39225.1 | SAMN02982927_03087 | SAMN02982927_01583 | Helicase conserved C-terminal domain-containing protein. | Myb-like DNA-binding domain-containing protein. | 0.723 |
| SFG88467.1 | SFG88445.1 | SAMN02982927_03087 | SAMN02982927_03086 | Helicase conserved C-terminal domain-containing protein. | Protein YqhG of unknown function. | 0.941 |
| SFG88467.1 | polA | SAMN02982927_03087 | SAMN02982927_01714 | Helicase conserved C-terminal domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.726 |
| SFG88467.1 | recA | SAMN02982927_03087 | SAMN02982927_00364 | Helicase conserved C-terminal domain-containing protein. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.753 |
| SFG88467.1 | rpoA | SAMN02982927_03087 | SAMN02982927_02892 | Helicase conserved C-terminal domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.817 |
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