Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG91563.1 | SFG91576.1 | SAMN02982927_03214 | SAMN02982927_03215 | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | Potassium/proton antiporter membrane subunit, CPA2 family (TC 2.A.37.5.2). | 0.430 |
SFG91563.1 | SFG91590.1 | SAMN02982927_03214 | SAMN02982927_03216 | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | TrkA domain protein. | 0.438 |
SFG91563.1 | guaA | SAMN02982927_03214 | SAMN02982927_03307 | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.627 |
SFG91576.1 | SFG91563.1 | SAMN02982927_03215 | SAMN02982927_03214 | Potassium/proton antiporter membrane subunit, CPA2 family (TC 2.A.37.5.2). | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | 0.430 |
SFG91576.1 | SFG91590.1 | SAMN02982927_03215 | SAMN02982927_03216 | Potassium/proton antiporter membrane subunit, CPA2 family (TC 2.A.37.5.2). | TrkA domain protein. | 0.973 |
SFG91590.1 | SFG91563.1 | SAMN02982927_03216 | SAMN02982927_03214 | TrkA domain protein. | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | 0.438 |
SFG91590.1 | SFG91576.1 | SAMN02982927_03216 | SAMN02982927_03215 | TrkA domain protein. | Potassium/proton antiporter membrane subunit, CPA2 family (TC 2.A.37.5.2). | 0.973 |
guaA | SFG91563.1 | SAMN02982927_03307 | SAMN02982927_03214 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | 0.627 |