STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG94669.1Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). (236 aa)    
Predicted Functional Partners:
SFG32079.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.972
SFG94762.1
Capsular exopolysaccharide family.
 
 
 0.909
SFG72916.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
   
 0.853
SFG94690.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.834
SFG94781.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.825
SFG96350.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.759
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.747
SFG94730.1
Protein-tyrosine phosphatase.
 
  
 0.742
SFG94710.1
UDPglucose 6-dehydrogenase.
    
 0.713
SFG28135.1
Polysaccharide biosynthesis protein.
 
 
 0.660
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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