Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG05864.1 | SFG15072.1 | SAMN02982927_00501 | SAMN02982927_00797 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.955 |
SFG05864.1 | SFG15440.1 | SAMN02982927_00501 | SAMN02982927_00811 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.447 |
SFG05864.1 | SFG16867.1 | SAMN02982927_00501 | SAMN02982927_00876 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.451 |
SFG05864.1 | SFG17680.1 | SAMN02982927_00501 | SAMN02982927_00911 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.979 |
SFG05864.1 | SFG32720.1 | SAMN02982927_00501 | SAMN02982927_01381 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.957 |
SFG05864.1 | SFG63297.1 | SAMN02982927_00501 | SAMN02982927_02286 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.969 |
SFG05864.1 | SFG73326.1 | SAMN02982927_00501 | SAMN02982927_02598 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.932 |
SFG05864.1 | SFG85267.1 | SAMN02982927_00501 | SAMN02982927_02986 | Diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.921 |
SFG05864.1 | SFG89918.1 | SAMN02982927_00501 | SAMN02982927_03137 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.969 |
SFG05864.1 | SFG95369.1 | SAMN02982927_00501 | SAMN02982927_03353 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.960 |
SFG15072.1 | SFG05864.1 | SAMN02982927_00797 | SAMN02982927_00501 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.955 |
SFG15072.1 | SFG15440.1 | SAMN02982927_00797 | SAMN02982927_00811 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.757 |
SFG15072.1 | SFG16867.1 | SAMN02982927_00797 | SAMN02982927_00876 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.759 |
SFG15072.1 | SFG17680.1 | SAMN02982927_00797 | SAMN02982927_00911 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.990 |
SFG15072.1 | SFG32720.1 | SAMN02982927_00797 | SAMN02982927_01381 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.985 |
SFG15072.1 | SFG63297.1 | SAMN02982927_00797 | SAMN02982927_02286 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.986 |
SFG15072.1 | SFG73326.1 | SAMN02982927_00797 | SAMN02982927_02598 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.958 |
SFG15072.1 | SFG85267.1 | SAMN02982927_00797 | SAMN02982927_02986 | Diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.950 |
SFG15072.1 | SFG89918.1 | SAMN02982927_00797 | SAMN02982927_03137 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.965 |
SFG15072.1 | SFG95369.1 | SAMN02982927_00797 | SAMN02982927_03353 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.976 |
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