STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG96552.1Transposase DDE domain-containing protein. (453 aa)    
Predicted Functional Partners:
SFG31259.1
Methyltransferase domain-containing protein.
 
  
 0.689
SFG31274.1
Hypothetical protein.
 
  
 0.689
SFG75523.1
Hypothetical protein.
  
  
 0.573
SFG14048.1
Transposase DDE domain group 1.
  
     0.570
SFG96487.1
Preprotein translocase subunit SecB.
       0.548
SFG96509.1
Hypothetical protein.
       0.548
SFG96531.1
Hypothetical protein.
       0.548
SFH00143.1
Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
  
 0.534
SFG31322.1
Putative inner membrane protein.
  
  
 0.530
SFG63792.1
Transposase DDE domain group 1.
  
     0.441
Your Current Organism:
Sporolactobacillus nakayamae
NCBI taxonomy Id: 269670
Other names: ATCC 700379, CCUG 41660, CIP 105319, DSM 11696, JCM 3514, LMG 18787, LMG:18787, NBRC 101526, S. nakayamae, strain M-114
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