Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Rru_A0010 | Rru_A0011 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | ABC transporter component. | 0.898 |
| Rru_A0010 | Rru_A0012 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.848 |
| Rru_A0010 | Rru_A0013 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Conserved hypothetical protein. | 0.812 |
| Rru_A0010 | Rru_A0014 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | KpsF/GutQ; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.814 |
| Rru_A0011 | Rru_A0010 | ABC transporter component. | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.898 |
| Rru_A0011 | Rru_A0012 | ABC transporter component. | Hypothetical protein. | 0.982 |
| Rru_A0011 | Rru_A0013 | ABC transporter component. | Conserved hypothetical protein. | 0.841 |
| Rru_A0011 | Rru_A0014 | ABC transporter component. | KpsF/GutQ; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.948 |
| Rru_A0011 | Rru_A1790 | ABC transporter component. | ABC-2 transporter component. | 0.911 |
| Rru_A0011 | Rru_A1791 | ABC transporter component. | ABC-2 transporter component. | 0.933 |
| Rru_A0011 | Rru_A2943 | ABC transporter component. | Permease YjgP/YjgQ. | 0.994 |
| Rru_A0011 | Rru_A3075 | ABC transporter component. | Permease YjgP/YjgQ. | 0.992 |
| Rru_A0011 | Rru_A3129 | ABC transporter component. | ABC-2 transporter component. | 0.925 |
| Rru_A0011 | Rru_A3307 | ABC transporter component. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.873 |
| Rru_A0012 | Rru_A0010 | Hypothetical protein. | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.848 |
| Rru_A0012 | Rru_A0011 | Hypothetical protein. | ABC transporter component. | 0.982 |
| Rru_A0012 | Rru_A0013 | Hypothetical protein. | Conserved hypothetical protein. | 0.964 |
| Rru_A0012 | Rru_A0014 | Hypothetical protein. | KpsF/GutQ; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.849 |
| Rru_A0012 | Rru_A2943 | Hypothetical protein. | Permease YjgP/YjgQ. | 0.686 |
| Rru_A0012 | Rru_A3075 | Hypothetical protein. | Permease YjgP/YjgQ. | 0.687 |
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