Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Rru_A0130 | Rru_A0521 | Chemotaxis sensory transducer. | CheA Signal Transduction Histidine Kinases (STHK). | 0.981 |
Rru_A0130 | Rru_A1277 | Chemotaxis sensory transducer. | Hpt sensor hybrid histidine kinase. | 0.866 |
Rru_A0130 | Rru_A1399 | Chemotaxis sensory transducer. | CheA Signal Transduction Histidine Kinases (STHK). | 0.874 |
Rru_A0130 | Rru_A1500 | Chemotaxis sensory transducer. | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.991 |
Rru_A0130 | Rru_A2033 | Chemotaxis sensory transducer. | PAS/PAC sensor hybrid histidine kinase. | 0.878 |
Rru_A0130 | Rru_A2108 | Chemotaxis sensory transducer. | Hpt sensor hybrid histidine kinase. | 0.868 |
Rru_A0130 | Rru_A2327 | Chemotaxis sensory transducer. | CheA Signal Transduction Histidine Kinases (STHK). | 0.886 |
Rru_A0130 | Rru_A2361 | Chemotaxis sensory transducer. | Multi-sensor hybrid histidine kinase. | 0.986 |
Rru_A0130 | Rru_A2406 | Chemotaxis sensory transducer. | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.922 |
Rru_A0130 | Rru_A2820 | Chemotaxis sensory transducer. | Multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA. | 0.847 |
Rru_A0521 | Rru_A0130 | CheA Signal Transduction Histidine Kinases (STHK). | Chemotaxis sensory transducer. | 0.981 |
Rru_A0521 | Rru_A1277 | CheA Signal Transduction Histidine Kinases (STHK). | Hpt sensor hybrid histidine kinase. | 0.963 |
Rru_A0521 | Rru_A1399 | CheA Signal Transduction Histidine Kinases (STHK). | CheA Signal Transduction Histidine Kinases (STHK). | 0.954 |
Rru_A0521 | Rru_A1500 | CheA Signal Transduction Histidine Kinases (STHK). | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
Rru_A0521 | Rru_A2033 | CheA Signal Transduction Histidine Kinases (STHK). | PAS/PAC sensor hybrid histidine kinase. | 0.972 |
Rru_A0521 | Rru_A2108 | CheA Signal Transduction Histidine Kinases (STHK). | Hpt sensor hybrid histidine kinase. | 0.963 |
Rru_A0521 | Rru_A2327 | CheA Signal Transduction Histidine Kinases (STHK). | CheA Signal Transduction Histidine Kinases (STHK). | 0.959 |
Rru_A0521 | Rru_A2361 | CheA Signal Transduction Histidine Kinases (STHK). | Multi-sensor hybrid histidine kinase. | 0.993 |
Rru_A0521 | Rru_A2406 | CheA Signal Transduction Histidine Kinases (STHK). | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.980 |
Rru_A0521 | Rru_A2820 | CheA Signal Transduction Histidine Kinases (STHK). | Multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA. | 0.972 |
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