STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A0907Microcompartments protein. (220 aa)    
Predicted Functional Partners:
Rru_A0912
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml.
 
 
 0.975
Rru_A0906
Polyhedral shell protein, EutL/PduB type.
 
  
 0.939
Rru_A0910
Ethanolamine utilization protein eutJ.
 
  
 0.887
Rru_A0909
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.881
Rru_A0914
Aldehyde dehydrogenase.
 
  
 0.877
Rru_A0908
Microcompartments protein.
 
    
0.769
Rru_A0915
Conserved hypothetical protein.
 
   
 0.742
Rru_A0905
Microcompartments protein.
 
    
0.665
Rru_A0913
ATP:cob(I)alamin adenosyltransferase.
 
  
 0.653
Rru_A0918
Histidine kinase.
 
   
 0.521
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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