STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A0930Iron-containing alcohol dehydrogenase. (383 aa)    
Predicted Functional Partners:
Rru_A1503
Zinc-containing alcohol dehydrogenase superfamily.
  
 0.980
Rru_A3405
Formaldehyde dehydrogenase (glutathione); Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.980
Rru_A0914
Aldehyde dehydrogenase.
 0.978
Rru_A0931
Aldehyde dehydrogenase (NAD+).
 
 0.977
Rru_A0285
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.929
Rru_A2513
Acetyl-CoA hydrolase/transferase.
  
  
 0.720
glgA
Glycogen/starch synthases, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.696
nifJ
Pyruvate-ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase.
  
  
 0.645
Rru_A1031
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
    
 0.585
Rru_A1032
Ethanolamine ammonia-lyase heavy chain.
  
 
 0.570
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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