Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rru_A0818 | vapC-2 | Rru_A0818 | Rru_A1062 | Hypothetical protein. | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.405 |
Rru_A1060 | Rru_A1061 | Rru_A1060 | Rru_A1061 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Helix-turn-helix protein, CopG. | 0.532 |
Rru_A1060 | Rru_A1063 | Rru_A1060 | Rru_A1063 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcription regulator protein. | 0.460 |
Rru_A1060 | vapC-2 | Rru_A1060 | Rru_A1062 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.532 |
Rru_A1061 | Rru_A1060 | Rru_A1061 | Rru_A1060 | Helix-turn-helix protein, CopG. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.532 |
Rru_A1061 | Rru_A1063 | Rru_A1061 | Rru_A1063 | Helix-turn-helix protein, CopG. | Putative transcription regulator protein. | 0.648 |
Rru_A1061 | vapC-2 | Rru_A1061 | Rru_A1062 | Helix-turn-helix protein, CopG. | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.955 |
Rru_A1063 | Rru_A1060 | Rru_A1063 | Rru_A1060 | Putative transcription regulator protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.460 |
Rru_A1063 | Rru_A1061 | Rru_A1063 | Rru_A1061 | Putative transcription regulator protein. | Helix-turn-helix protein, CopG. | 0.648 |
Rru_A1063 | Rru_A1064 | Rru_A1063 | Rru_A1064 | Putative transcription regulator protein. | Plasmid maintenance system killer. | 0.458 |
Rru_A1063 | vapC-2 | Rru_A1063 | Rru_A1062 | Putative transcription regulator protein. | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.648 |
Rru_A1064 | Rru_A1063 | Rru_A1064 | Rru_A1063 | Plasmid maintenance system killer. | Putative transcription regulator protein. | 0.458 |
Rru_A1064 | vapC-2 | Rru_A1064 | Rru_A1062 | Plasmid maintenance system killer. | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.469 |
vapC-2 | Rru_A0818 | Rru_A1062 | Rru_A0818 | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.405 |
vapC-2 | Rru_A1060 | Rru_A1062 | Rru_A1060 | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.532 |
vapC-2 | Rru_A1061 | Rru_A1062 | Rru_A1061 | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Helix-turn-helix protein, CopG. | 0.955 |
vapC-2 | Rru_A1063 | Rru_A1062 | Rru_A1063 | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Putative transcription regulator protein. | 0.648 |
vapC-2 | Rru_A1064 | Rru_A1062 | Rru_A1064 | PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Plasmid maintenance system killer. | 0.469 |