STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A1282Two component transcriptional regulator, winged helix family. (249 aa)    
Predicted Functional Partners:
Rru_A2361
Multi-sensor hybrid histidine kinase.
 
 
0.949
Rru_A2935
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.939
Rru_A3756
PAS/PAC sensor hybrid histidine kinase.
 
 0.937
Rru_A1277
Hpt sensor hybrid histidine kinase.
 
 0.926
Rru_A0438
Multi-sensor signal transduction histidine kinase.
 
 
 0.911
Rru_A2406
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.871
Rru_A2108
Hpt sensor hybrid histidine kinase.
 
 
0.859
Rru_A1500
Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
0.855
Rru_A2033
PAS/PAC sensor hybrid histidine kinase.
 
0.854
Rru_A3039
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.854
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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