Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Rru_A0496 | Rru_A0837 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | Leucine-rich repeat. | 0.500 |
| Rru_A0496 | Rru_A1071 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | Adenylate/guanylate cyclase. | 0.668 |
| Rru_A0496 | Rru_A1431 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | Transcriptional regulator, Crp/Fnr family. | 0.596 |
| Rru_A0496 | Rru_A1500 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.545 |
| Rru_A0496 | Rru_A2361 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | Multi-sensor hybrid histidine kinase. | 0.579 |
| Rru_A0496 | Rru_A2636 | Cyclic nucleotide-binding domain (cNMP-BD) protein. | Transcriptional regulator, Crp/Fnr family. | 0.710 |
| Rru_A0837 | Rru_A0496 | Leucine-rich repeat. | Cyclic nucleotide-binding domain (cNMP-BD) protein. | 0.500 |
| Rru_A0837 | Rru_A1071 | Leucine-rich repeat. | Adenylate/guanylate cyclase. | 0.693 |
| Rru_A0837 | Rru_A1431 | Leucine-rich repeat. | Transcriptional regulator, Crp/Fnr family. | 0.500 |
| Rru_A0837 | Rru_A1500 | Leucine-rich repeat. | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.433 |
| Rru_A0837 | Rru_A2361 | Leucine-rich repeat. | Multi-sensor hybrid histidine kinase. | 0.547 |
| Rru_A0837 | Rru_A2636 | Leucine-rich repeat. | Transcriptional regulator, Crp/Fnr family. | 0.500 |
| Rru_A1071 | Rru_A0496 | Adenylate/guanylate cyclase. | Cyclic nucleotide-binding domain (cNMP-BD) protein. | 0.668 |
| Rru_A1071 | Rru_A0837 | Adenylate/guanylate cyclase. | Leucine-rich repeat. | 0.693 |
| Rru_A1071 | Rru_A1431 | Adenylate/guanylate cyclase. | Transcriptional regulator, Crp/Fnr family. | 0.466 |
| Rru_A1071 | Rru_A1500 | Adenylate/guanylate cyclase. | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.781 |
| Rru_A1071 | Rru_A2361 | Adenylate/guanylate cyclase. | Multi-sensor hybrid histidine kinase. | 0.832 |
| Rru_A1071 | Rru_A2636 | Adenylate/guanylate cyclase. | Transcriptional regulator, Crp/Fnr family. | 0.466 |
| Rru_A1427 | Rru_A1428 | Carbon-monoxide dehydrogenase, catalytic subunit. | Cobyrinic acid a,c-diamide synthase. | 0.931 |
| Rru_A1427 | Rru_A1429 | Carbon-monoxide dehydrogenase, catalytic subunit. | Hypothetical protein. | 0.576 |
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