STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A1503Zinc-containing alcohol dehydrogenase superfamily. (360 aa)    
Predicted Functional Partners:
Rru_A0930
Iron-containing alcohol dehydrogenase.
  
 0.980
Rru_A3405
Formaldehyde dehydrogenase (glutathione); Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.976
Rru_A0285
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.920
Rru_A0931
Aldehyde dehydrogenase (NAD+).
  
 
 0.916
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.914
Rru_A3461
Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family.
    
 0.914
Rru_A0904
Iron-containing alcohol dehydrogenase.
  
 
 0.814
Rru_A3542
Malate dehydrogenase; Oxaloacetate decarboxylating (NADP+), phosphate acetyltransferase.
  
  
 0.645
Rru_A1468
Phosphate butyryltransferase.
  
  
 0.633
Rru_A0903
Pyruvate formate-lyase.
   
  
 0.591
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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