STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A1526Cobyrinic acid a,c-diamide synthase. (212 aa)    
Predicted Functional Partners:
Rru_A3628
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
 
 
 0.920
Rru_A1525
Nucleoside diphosphate pyrophosphatase.
       0.636
Rru_A0206
Hydrogenobyrinic acid a,c-diamide cobaltochelatase.
    
 0.532
Rru_A0207
Cobalt chelatase, CobT subunit.
     
  0.499
BchH
Hydrogenobyrinic acid a,c-diamide cobaltochelatase.
     
  0.499
CobH
precorrin-8X methylmutase.
     
  0.499
CobN
Hydrogenobyrinic acid a,c-diamide cobaltochelatase.
     
  0.499
nifJ
Pyruvate-ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase.
     
 0.473
Rru_A2817
Phasin.
  
     0.438
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.431
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.