Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rru_A1603 | Rru_A2361 | Rru_A1603 | Rru_A2361 | PhoH-like protein. | Multi-sensor hybrid histidine kinase. | 0.485 |
| Rru_A1603 | Rru_A2767 | Rru_A1603 | Rru_A2767 | PhoH-like protein. | Ribonuclease G (RNase G). | 0.421 |
| Rru_A1603 | Rru_A3448 | Rru_A1603 | Rru_A3448 | PhoH-like protein. | Uncharacterized P-loop ATPase protein UPF0042; Displays ATPase and GTPase activities. | 0.432 |
| Rru_A1603 | clpX | Rru_A1603 | Rru_A1551 | PhoH-like protein. | ClpX, ATPase regulatory subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.512 |
| Rru_A1603 | cmk | Rru_A1603 | Rru_A0294 | PhoH-like protein. | Cytidylate kinase. | 0.486 |
| Rru_A1603 | era | Rru_A1603 | Rru_A1851 | PhoH-like protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.451 |
| Rru_A1603 | recO | Rru_A1603 | Rru_A1849 | PhoH-like protein. | Recombination protein O, RecO; Involved in DNA repair and RecF pathway recombination. | 0.741 |
| Rru_A1603 | rsfS | Rru_A1603 | Rru_A1236 | PhoH-like protein. | Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.412 |
| Rru_A1603 | ybeY | Rru_A1603 | Rru_A3772 | PhoH-like protein. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.883 |
| Rru_A2361 | Rru_A1603 | Rru_A2361 | Rru_A1603 | Multi-sensor hybrid histidine kinase. | PhoH-like protein. | 0.485 |
| Rru_A2361 | Rru_A2767 | Rru_A2361 | Rru_A2767 | Multi-sensor hybrid histidine kinase. | Ribonuclease G (RNase G). | 0.436 |
| Rru_A2361 | clpX | Rru_A2361 | Rru_A1551 | Multi-sensor hybrid histidine kinase. | ClpX, ATPase regulatory subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.480 |
| Rru_A2361 | rsfS | Rru_A2361 | Rru_A1236 | Multi-sensor hybrid histidine kinase. | Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.412 |
| Rru_A2361 | ybeY | Rru_A2361 | Rru_A3772 | Multi-sensor hybrid histidine kinase. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.498 |
| Rru_A2767 | Rru_A1603 | Rru_A2767 | Rru_A1603 | Ribonuclease G (RNase G). | PhoH-like protein. | 0.421 |
| Rru_A2767 | Rru_A2361 | Rru_A2767 | Rru_A2361 | Ribonuclease G (RNase G). | Multi-sensor hybrid histidine kinase. | 0.436 |
| Rru_A2767 | Rru_A3448 | Rru_A2767 | Rru_A3448 | Ribonuclease G (RNase G). | Uncharacterized P-loop ATPase protein UPF0042; Displays ATPase and GTPase activities. | 0.783 |
| Rru_A2767 | clpX | Rru_A2767 | Rru_A1551 | Ribonuclease G (RNase G). | ClpX, ATPase regulatory subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.435 |
| Rru_A3448 | Rru_A1603 | Rru_A3448 | Rru_A1603 | Uncharacterized P-loop ATPase protein UPF0042; Displays ATPase and GTPase activities. | PhoH-like protein. | 0.432 |
| Rru_A3448 | Rru_A2767 | Rru_A3448 | Rru_A2767 | Uncharacterized P-loop ATPase protein UPF0042; Displays ATPase and GTPase activities. | Ribonuclease G (RNase G). | 0.783 |
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